The C. elegans heterochronic genes program stage-specific temporal identities in multiple tissues during larval development. These genes include the first two miRNA-encoding genes discovered,
lin-4 and
let-7. We show that
lin-58 alleles, identified as
lin-4 suppressors, define another miRNA that controls developmental time. These alleles are unique in that they contain point mutations in a gene regulatory element of
mir-48, a
let-7 family member.
mir-48 is expressed prematurely in
lin-58 mutants, whereas expression of
mir-241, another
let-7 family member residing immediately upstream of
mir-48, appears to be unaffected. A
mir-48 transgene bearing a
lin-58 point mutation causes strong precocious phenotypes in the hypodermis and vulva when expressed from multicopy arrays.
mir-48::gfp fusions reveal expression in these tissues, and inclusion of a
lin-58 mutation causes precocious and enhanced gfp expression. These results suggest that
lin-58 alleles disrupt a repressor binding site that restricts the time of miR-48 action in wild-type animals.