WBPaper00058942:henn-1(pk2295)_upregulated

Differential expression analysis, including fold change and p value calculation, was done using DESeq2 v.1.18.1 with the Benjamin Hochberg multiple test correction applied (FDR = 0.05). mRNAs significantly upregulated >1.3 fold in henn-1(pk2295) gonads comparing to in N2 gonads 68 - 70 hours after L1 larva stage.

WBPaper00058942:henn-1(pk2295)_downregulated

Differential expression analysis, including fold change and p value calculation, was done using DESeq2 v.1.18.1 with the Benjamin Hochberg multiple test correction applied (FDR = 0.05). mRNAs significantly downregulated >1.3 fold in henn-1(pk2295) gonads comparing to in N2 gonads 68 - 70 hours after L1 larva stage.

WBPaper00051425:CB_L1_vs_embryo_downregulated

Benjamin and Hochberg corrected p-value < 0.05. C.briggsae proteins that showed significantly decreased at L1 larva stage than in emrbyo.

WBPaper00051425:CB_L1_vs_embryo_upregulated

Benjamin and Hochberg corrected p-value < 0.05. C.briggsae proteins that showed significantly increased at L1 larva stage than in emrbyo.

WBPaper00051425:CB_L4_vs_embryo_upregulated

Benjamin and Hochberg corrected p-value < 0.05. C.briggsae proteins that showed significantly increased at L4 larva stage than in emrbyo.

WBPaper00051425:CB_L4_vs_embryo_downregulated

Benjamin and Hochberg corrected p-value < 0.05. C.briggsae proteins that showed significantly decreased at L4 larva stage than in emrbyo.

WBPaper00062684:pathogen_upregulated_N2

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in N2 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_downregulated_N2

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in N2 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_downregulated_CB4856

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in CB4856 animals that showed significantly decreased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)

WBPaper00062684:pathogen_upregulated_CB4856

DESeq2 (v.3.1.0), adjusted P-value < 0.05 and fold change >= 2. Transcripts in CB4856 animals that showed significantly increased expression across all pathogens (S. epidermidis, P. rettgeri, P. aeruginosa, or S. aureus vs. OP50)