- WBPaper00044616:alg-3-4_downregulated_gene
More than 2 fold change in expression were considered differentially expressed.
Genes that showed decreased expression in alg-3/4 males comparing to in WT males, according to RNAseq results.
- WBPaper00044616:alg-3-4_upregulated_gene
More than 2 fold change in expression were considered differentially expressed.
Genes that showed increased expression in alg-3/4 males comparing to in WT males, according to RNAseq results.
- WBPaper00032528:L3_depleted
To generate the top10 and bottom10 gene sets, authors ranked all genes by mean expression array signal intensity across the three replicates, then took the top and bottom deciles (1,841 genes each) to represent genes with high and low expression.
Genes in the bottom 10% of expression level across the triplicate L3 samples. To generate the top10 and bottom10 gene sets, authors ranked all genes by mean expression array signal intensity across the three replicates, then took the top and bottom deciles (1,841 genes each) to represent genes with high and low expression.
- WBPaper00032528:L3_enriched
To generate the top10 and bottom10 gene sets, authors ranked all genes by mean expression array signal intensity across the three replicates, then took the top and bottom deciles (1,841 genes each) to represent genes with high and low expression.
Genes in the top 10% of expression level across the triplicate L3 samples. To generate the top10 and bottom10 gene sets, authors ranked all genes by mean expression array signal intensity across the three replicates, then took the top and bottom deciles (1,841 genes each) to represent genes with high and low expression.
- [cgc5428]:clustered_muscle_genes
A Student t-test was used to determine which genes showed a mean enrichment significantly greater than the mean enrichment for all genes.
Genes enriched in muscle.
- WBPaper00025032:PAL-1_target_genes
Clustering, correlation to known target genes and ANOVA were used to score the PAL-1 target potential of each gene.
Potential PAL-1 target genes.
- [cgc5428]:L1_muscle_enriched
A Student t-test was used to determine which genes showed a mean enrichment significantly greater than the mean enrichment for all genes.
The cluster contains genes that are significantly enriched in L1 muscle.