vieSi35

Caenorhabditis elegans

[Psas-6::SAS-6reencoded-mD::GFP; Cbr-unc-119(+)]

NQ570

Caenorhabditis elegans

[cgc5767]:expression_class_MD

A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing. Maternal degradation class (MD): genes that are the subset of maternal genes that decrease without first increasing in abundance.

R09H10.5

Caenorhabditis elegans

Enriched in several structures, including ALM; BDU; coelomocyte; germ line; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including myrf-1; mxl-2; and cua-1 based on microarray; proteomic; and RNA-seq studies. Is affected by sixteen chemicals including rotenone; D-glucose; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Innate immunity regulator; MD domain; and EGF-like domain.

[cgc5767]:expression_class_MD_pd(23_min)

A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing. Maternal degradation (MD) subclasses are based on the earliest significant decrease (abbreviated pd for primary decrease).

[cgc5767]:expression_class_MD_pd(66_min)

A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing. Maternal degradation (MD) subclasses are based on the earliest significant decrease (abbreviated pd for primary decrease).

[cgc5767]:expression_class_MD_pd(41_min)

A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing. Maternal degradation (MD) subclasses are based on the earliest significant decrease (abbreviated pd for primary decrease).

[cgc5767]:expression_class_MD_pd(PC32)

A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing. Maternal degradation (MD) subclasses are based on the earliest significant decrease (abbreviated pd for primary decrease).

[cgc5767]:expression_class_MD_pd(53_min)

A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing. Maternal degradation (MD) subclasses are based on the earliest significant decrease (abbreviated pd for primary decrease).

hrg-11.2

Caenorhabditis elegans

Enriched in AFD; PLM; RMED; intestine; and pharyngeal muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and proteomic studies. Is affected by several genes including cyc-1; hyl-2; and myrf-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-six chemicals including rotenone; manganese chloride; and mianserin based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: von Willebrand factor, type A; IRG7 N-terminal galactose binding domain; Irg-7-like, Ig-like domain; C-type lectin-like; Innate immunity regulator; MD domain; Lectin C-type domain; Phosphorylation site; von Willebrand factor A-like domain superfamily; C-type lectin-like/link domain superfamily; EGF-like domain; von Willebrand factor type A domain; and C-type lectin fold.